Emam, S., Issa, N., El-Attar, M. (2019). EVALUATION OF THE EFFECT OF SINGLE NUCLEOTIDE POLYMORPHISM 1772C>T IN HIF-α GENE ON THE RESIDUAL RIDGE RESORPTION OF THE MANDIBLE IN THE EGYPTIAN POPULATION. Alexandria Dental Journal, 44(3), 50-55. doi: 10.21608/adjalexu.2019.63556
Samar M. Emam; Noha M. Issa; Mohamed S. El-Attar. "EVALUATION OF THE EFFECT OF SINGLE NUCLEOTIDE POLYMORPHISM 1772C>T IN HIF-α GENE ON THE RESIDUAL RIDGE RESORPTION OF THE MANDIBLE IN THE EGYPTIAN POPULATION". Alexandria Dental Journal, 44, 3, 2019, 50-55. doi: 10.21608/adjalexu.2019.63556
Emam, S., Issa, N., El-Attar, M. (2019). 'EVALUATION OF THE EFFECT OF SINGLE NUCLEOTIDE POLYMORPHISM 1772C>T IN HIF-α GENE ON THE RESIDUAL RIDGE RESORPTION OF THE MANDIBLE IN THE EGYPTIAN POPULATION', Alexandria Dental Journal, 44(3), pp. 50-55. doi: 10.21608/adjalexu.2019.63556
Emam, S., Issa, N., El-Attar, M. EVALUATION OF THE EFFECT OF SINGLE NUCLEOTIDE POLYMORPHISM 1772C>T IN HIF-α GENE ON THE RESIDUAL RIDGE RESORPTION OF THE MANDIBLE IN THE EGYPTIAN POPULATION. Alexandria Dental Journal, 2019; 44(3): 50-55. doi: 10.21608/adjalexu.2019.63556
EVALUATION OF THE EFFECT OF SINGLE NUCLEOTIDE POLYMORPHISM 1772C>T IN HIF-α GENE ON THE RESIDUAL RIDGE RESORPTION OF THE MANDIBLE IN THE EGYPTIAN POPULATION
1Dentist at the Alexandria University Students’ clinic, Alexandria University, Alexandria, Egypt
2Lecturer of Human Genetics, Medical Research Institute, Alexandria University, Alexandria, Egypt
3Professor of Prosthodontics, Faculty of Dentistry, Alexandria University, Alexandria, Egypt
Abstract
INTRODUCTION: Atrophic residual ridges have always been an obstacle for a successful prosthodontics treatment. Residual ridge resorption (RRR) was attributed to a combination of anatomical, metabolic and mechanical determinants. Lately, the genetic factor was considered since single nucleotide polymorphisms (SNPs) in relevant genes have been present in patients having severe RRR. OBJECTIVES: The aim of the current study was to investigate for the first time the relation between SNP 1772C>T in Hypoxia Inducible Factor-1 alpha (HIF-1α) gene and the presence of severely resorbed edentulous mandibular ridges in a sample of the Egyptian population. MATERIALS AND METHODS: The study was conducted on 50 subjects divided into case and control groups according to the residual ridge height. Saliva was used as a convenient source of DNA in the dental clinic. PCR-Restriction Fragment Length Polymorphism was performed for genotyping. RESULTS: A statistically significant difference in the distribution of the TT genotype between both groups was present. There was also a difference in the distribution of the CC and CT genotypes but it wasn’t statistically significant. The T alleles were more abundant in the case group while the control group showed more frequency of the C allele with no statistical significance. CONCLUSIONS: This study concluded that the TT genotype of the 1772C>T polymorphism of HIF-1α gene is related to the presence of severely atrophied residual ridges. This SNP can be used as a marker to predict the future condition of the ridge using saliva samples. Further studies on larger scale are recommended.
Schropp L, Wenzel A, Kostopoulos L, Karring T. Bone healing and soft tissue contour changes following singletooth extraction: a clinical and radiographic 12-month prospective study. Int J Periodontics Restorative Dent. 2003;23:313-23.
Jahangiri L, Devlin H, Ting K, Nishimura I. Current perspectives in residual ridge remodeling and its clinical implications: A review. J Prosthet Dent. 1998;802:224-37.
Zarb GA, Hobrick JA, Eckert SE, Rhonda FJ. Prosthodontic treatment for edentulous patients. 13th ed. St Louis: Mosby; 2013. P 48-9.
Kim JJ, Shon HC. Chang JH. Kim KS. Lee SW. Kim HIF1 Alpha and VEGF Expression in Fracture Healing. JKOA. 2008;43:479-87.
Paek J, Oh Y, Kim J, Lee JH. Single nucleotide polymorphisms in HIF-1 alpha gene and residual ridge resorption (RRR) of mandible in Korean population. Gene Expression. 2015;16:137-44.
Song JH, Lee JH. Single Nucleotide Polymorphisms and Haplotypes in Vascular Endothelial Growth Factor Gene and Residual Ridge Resorption of Mandible in Korean Population. J Biomater Nanobiotechnol. 2014;5:39-43.
Zhao T, Lv J, Zhao J, Nzekebaloudou M. Hypoxiainducible factor-1 alpha gene polymorphisms and cancer risk: a meta-analysis. J Exp Clin Cancer Res. 2009;28: 159.
Li Y, Li C, Shi H, Lou L, Liu P. The association between the rs11549465 polymorphism in the hif-1α gene and cancer risk: a meta-analysis. Int J Clin Exp Med. 2015;8:1561-74.
Fraga A, Ribeiro R, Coelho A, Vizcaíno JR, Coutinho H, Lopes JM, et al. Genetic polymorphisms in key hypoxia-regulated downstream molecules and phenotypic correlation in prostate cancer. BMC Urol. 2017;17:12.
Alidoosti M, Ghaedi M, Soleimani A, Bakhtiyari S, Rezvanfard M, Golkhu S, et al. Study on the role of environmental parameters and HIF-1A gene polymorphism in coronary collateral formation among patients with ischemic heart disease. Clin Biochem. 2011;44:1421-4.
Chachami G, Kalousi A, Papatheodorou L, Lyberopoulou A, Nasikas V, Tanimoto K, et al. An association study between hypoxia inducible factor-1alpha (HIF-1α) polymorphisms and osteonecrosis. PLoS One. 2013;8:e79647.
Cięszczyk P, Eider J, Arczewska A, Ostanek M, LeońskaDuniec A, Sawczyn S, et al. The HIF1A Gene PRO582SER polymorphism in polish power-orientated athletes. Biol Sport 2011; 28: 111-4.
Yu ZG, Wang BZ, Cheng ZZ. The association of genetic polymorphisms of hypoxia inducible factor-1 alpha and vascular endothelial growth factor with increased risk of chronic obstructive pulmonary disease: A case-control study. Kaohsiung J Med Sci. 2017;33:433-41.
Lin C, Yin G, Ou M, Zheng S. The effects of HIF-1α and VEGF on wound healing in diabetic mice. Biomed Res. 2017;28:8121-4.
Daniel W. Biostatistics. A foundation for analysis in the health science. 6th ed. NY: John Wiley and sons, Inc; 1995.
McGarry TG, Nimmo A, Skiba JF, Ahlstrom RH, Smith CR, Koumjian JH. Classification system for complete edentulism. The American College of Prosthodontics. J Prosthodont. 1999;8:27-39.
James C, Iwasiow RM, Birnboim HC. Human genomic DNA content of saliva samples collected with the Oragene® selfcollection kit. DNA Genotek Inc 2011. Available at: http://www.dnagenotek.com
Kalyanasundaram D, Kim JH, Yeo WH, Oh K, Lee KH, Kim MH, et al. Rapid extraction and preservation of genomic DNA from human samples. Anal Bioanal Chem. 2013;405:1977-83.
Mendoza ÁC, Volante BB, Hernández ME, Mendoza CC, Pliego AF, Baptista Gonzalez HA, et al. Design of a protocol for obtaining genomic DNA from saliva using mouthwash: Samples taken from patients with periodontal disease. J Oral Biol Craniofac Res. 2016;6:129-34.
QIAGEN Supplementary Protocol. Isolation of genomic DNA from saliva and mouthwash using the QIAamp® DNA Blood Mini Kit; vacuum procedure. QIAGEN 2010. Available at: https://www.qiagen.com
Kotz S, Balakrishnan N, Read CB, Vidakovic B. Encyclopedia of statistical sciences. 2nd ed. Hoboken, N.J.: Wiley-Inerscience; 2006.
Kirkpatrick LA, Feeney BC. A simple guide to IBM SPSS statistics for version 20.0. Student ed. Belmont, Calif.: Wadsworth, Cengage Learning; 2013.
QIAGEN Supplementary Protocol. Isolation of genomic DNA from saliva and mouthwash using the QIAamp® DNA Blood Mini Kit; vacuum procedure. QIAGEN 2010. Available at: https://www.qiagen.com
Yang Xi, Hong-Cheng Zhu, Chi Zhang, Qin Qin, Jia Liu, Li-Ping Xu, et al. HIF-1α 1772 C/T and 1790 G/A Polymorphisms Are Significantly Associated with Higher Cancer Risk: An Updated Meta-Analysis from 34 CaseControl Studies. PLoS One. 2013;8:e80396.
Suwanwela J, Lee J, Lin A, Ucer TC, Devlin H, Sinsheimer J, et al. A genetic association study of single nucleotide polymorphisms in FGFR1OP2/wit3.0 and longterm atrophy of edentulous mandible. PLoS One. 2011;6:e16204.
Kim JH, Oh MY, Paek J, Lee J. Association between FGFR1OP2/wit3.0 Polymorphisms and Residual Ridge Resorption of Mandible in Korean Population. PLoS One. 2012;7:e42734.
23andMe. 2017. Available at: https://www.23andme.com
Genetics Home Reference provides consumer-friendly information about the effects of genetic variation on human health. 2017. Available at: https://ghr.nlm.nih.gov.
Kim HO, Jo YH, Lee J, Lee SS, Yoon KS. The C1772T genetic polymorphism in human HIF-1alpha gene associates with expression of HIF-1alpha protein in breast cancer. Oncol Rep. 2008;20:1181-7.
Schloss AJ, Verjee Z, Spielman AI. The Era of Personalized Dentistry Is Upon Us: It's Time to Include It in Dental Curricula. J Dent Educ. 2017;81:363-5.
Kornman KS, Duffy GW. Personalized medicine: will dentistry ride the wave or watch from the beach. J Dent Res. 2012;9(7 Suppl):8S-11S.
Tabak LA. A revolution in biomedical assessment: the development of salivary diagnostics. J Dent Educ. 2001;65:1335-9.
Giannobile WV, Braun TM, Caplis AK, Doucette-Stamm L, Duff GW, Kornman KS. Patient stratification for preventive care in dentistry. J Dent Res. 2013;92:694-701.
Soohyung Lee S, Kim J, Hwang J, Kim S, Lee J , Han D. Investigation of Pathogenic Genes in Peri-Implantitis from Implant Clustering Failure Patients: A Whole-Exome Sequencing Pilot Study. PLoS ONE. 2014;9:e99-360.
Zeng Z, Shaffer JR, Wang X, Feingold E, Weeks DE, Lee M, et al. Genome-wide association studies of pit-andfissure- and smooth-surface caries in permanent dentition. J Dent Res. 2013;92:432-7.
Scanlon CS, Van Tubergen EA, Inglehart RC, D'Silva NJ. Biomarkers of epithelial-mesenchymal transition in squamous cell carcinoma. J Dent Res. 2013;92:114-21.
Van't Veer LJ, Bernards R. Enabling personalized cancer medicine through analysis of gene-expression patterns. Nature. 2008;452:564-70.